USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: P57053 USC-OGP 2-DE database:  P57053 P57053 General information about the entry View entry in simple text format Entry name H2BFS_HUMAN Primary accession number P57053 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Histone H2B type F-S; AltName: Full=Histone H2B.s; Short=H2B/s;. Gene name Name=H2BFS Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1329: pI=4.39; Mw=16914 SPOT OGP-1331: pI=5.13; Mw=16684 Cross-references UniProtKB/Swiss-Prot P57053; H2BFS_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name H2BFS_HUMAN Primary accession number P57053 Secondary accession number(s) A0AVF9 Q5R2W0 Sequence was last modified on  January 23, 2007 (version 2) Annotations were last modified on  March 15, 2017 (version 150) Name and origin of the protein Description RecName: Full=Histone H2B type F-S; AltName: Full=Histone H2B.s; Short=H2B/s; Gene name Name=H2BFS Encoded on Name=H2BFS Keywords Acetylation; Antibiotic; Antimicrobial; Chromosome; Complete proteome; Direct protein sequencing; DNA-binding; Glycoprotein; Isopeptide bond; Methylation; Nucleosome core; Nucleus; Phosphoprotein; Reference proteome; Ubl conjugation. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL AB041017; BAD74065.1; -; Genomic_DNA EMBL AP001751; BAA95538.1; -; Genomic_DNA PIR S65409; S65409; . RefSeq XP_006723981.1; XM_006723918.3; . ProteinModelPortal P57053; -; . SMR P57053; -; . IntAct P57053; 7; . MINT MINT-5000257; -; . STRING 9606.ENSP00000349430; -; . iPTMnet P57053; -; . PhosphoSitePlus P57053; -; . SwissPalm P57053; -; . DMDM 9973351; -; . EPD P57053; -; . MaxQB P57053; -; . PaxDb P57053; -; . PeptideAtlas P57053; -; . PRIDE P57053; -; . TopDownProteomics P57053; -; . Ensembl ENST00000599962; ENSP00000481622; ENSG00000234289; . GeneID 102724334; -; . KEGG hsa:102724334; -; . UCSC uc002zdj.2; human; . DisGeNET 102724334; -; . DisGeNET 54145; -; . GeneCards H2BFS; -; . H-InvDB HIX0040944; -; . HGNC HGNC:4762; H2BFS; . HPA HPA042205; -; . HPA HPA043013; -; . HPA HPA048671; -; . neXtProt NX_P57053; -; . OpenTargets ENSG00000234289; -; . eggNOG KOG1744; Eukaryota; . eggNOG ENOG4111NV5; LUCA; . GeneTree ENSGT00870000136414; -; . HOVERGEN HBG007774; -; . InParanoid P57053; -; . OMA YTSANIM; -; . OrthoDB EOG091G0XGD; -; . Reactome R-HSA-1221632; Meiotic synapsis; . Reactome R-HSA-171306; Packaging Of Telomere Ends; . Reactome R-HSA-201722; Formation of the beta-catenin:TCF transactivating complex; . Reactome R-HSA-212300; PRC2 methylates histones and DNA; . Reactome R-HSA-2299718; Condensation of Prophase Chromosomes; . Reactome R-HSA-2559580; Oxidative Stress Induced Senescence; . Reactome R-HSA-2559582; Senescence-Associated Secretory Phenotype (SASP); . Reactome R-HSA-2559586; DNA Damage/Telomere Stress Induced Senescence; . Reactome R-HSA-427359; SIRT1 negatively regulates rRNA Expression; . Reactome R-HSA-427389; ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression; . Reactome R-HSA-427413; NoRC negatively regulates rRNA expression; . Reactome R-HSA-5250924; B-WICH complex positively regulates rRNA expression; . Reactome R-HSA-5334118; DNA methylation; . Reactome R-HSA-5578749; Transcriptional regulation by small RNAs; . Reactome R-HSA-5617472; Activation of anterior HOX genes in hindbrain development during early embryogenesis; . Reactome R-HSA-5625886; Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3; . Reactome R-HSA-5693565; Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks; . Reactome R-HSA-5693571; Nonhomologous End-Joining (NHEJ); . Reactome R-HSA-5693607; Processing of DNA double-strand break ends; . Reactome R-HSA-606279; Deposition of new CENPA-containing nucleosomes at the centromere; . Reactome R-HSA-69473; G2/M DNA damage checkpoint; . Reactome R-HSA-73728; RNA Polymerase I Promoter Opening; . Reactome R-HSA-73777; RNA Polymerase I Chain Elongation; . Reactome R-HSA-912446; Meiotic recombination; . Reactome R-HSA-977225; Amyloid fiber formation; . PRO PR:P57053; -; . Proteomes UP000005640; Chromosome 21; . Genevisible P57053; HS; . GO GO:0005829; C:cytosol; IDA:HPA; . GO GO:0005615; C:extracellular space; IDA:UniProtKB; . GO GO:0005654; C:nucleoplasm; IDA:HPA; . GO GO:0000786; C:nucleosome; IEA:UniProtKB-KW; . GO GO:0005634; C:nucleus; IDA:UniProtKB; . GO GO:0003677; F:DNA binding; IBA:GO_Central; . GO GO:0019731; P:antibacterial humoral response; IDA:UniProtKB; . GO GO:0050830; P:defense response to Gram-positive bacterium; IDA:UniProtKB; . GO GO:0002227; P:innate immune response in mucosa; IDA:UniProtKB; . GO GO:0006334; P:nucleosome assembly; IBA:GO_Central; . GO GO:0021762; P:substantia nigra development; IEP:UniProtKB; . Gene3D 1.10.20.10; -; 1; . InterPro IPR009072; Histone-fold; . InterPro IPR007125; Histone_H2A/H2B/H3; . InterPro IPR000558; Histone_H2B; . PANTHER PTHR23428; PTHR23428; 1; . Pfam PF00125; Histone; 1; . PRINTS PR00621; HISTONEH2B; . SMART SM00427; H2B; 1; . SUPFAM SSF47113; SSF47113; 1; . PROSITE PS00357; HISTONE_H2B; 1; .

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• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
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• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

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